Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | DXA34_11590 | Not Available | Negative | 2529202 - 2529558 | 12921.5 |
| ferredoxin | DXA34_11595 | Not Available | Negative | 2529572 - 2530357 | 27625.1 |
| crp/fnr family transcriptional regulator | DXA34_11600 | Not Available | Positive | 2530518 - 2531171 | 24793.1 |
| padr family transcriptional regulator | DXA34_11605 | Not Available | Positive | 2531384 - 2531704 | 12329.0 |
| duf2812 domain-containing protein | DXA34_11610 | Not Available | Positive | 2531704 - 2531961 | 9785.32 |
| hypothetical protein | DXA34_11615 | Not Available | Positive | 2531968 - 2532408 | 16687.1 |
| hypothetical protein | DXA34_11620 | Not Available | Positive | 2532418 - 2532690 | 10638.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXA34_11625 | Not Available | Positive | 2532781 - 2533962 | 43538.4 |
| vanz family protein | DXA34_11630 | Not Available | Positive | 2533967 - 2534461 | 18568.8 |
| trna pseudouridine(38-40) synthase trua | DXA34_11635 | Not Available | Positive | 2534443 - 2535240 | 29722.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
