Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacyl-coa dehydratase | DXA34_11540 | Not Available | Positive | 2515983 - 2517425 | 53970.2 |
| 2-hydroxyacyl-coa dehydratase | DXA34_11545 | Not Available | Positive | 2517428 - 2518579 | 43035.8 |
| polysaccharide biosynthesis protein | DXA34_11550 | Not Available | Negative | 2519224 - 2520726 | 53604.7 |
| cysteine desulfurase nifs | DXA34_11555 | Not Available | Positive | 2521048 - 2522241 | 43849.6 |
| fe-s cluster assembly scaffold protein nifu | DXA34_11560 | Not Available | Positive | 2522296 - 2522733 | 15946.0 |
| trna 2-thiouridine(34) synthase mnma | DXA34_11565 | Not Available | Positive | 2522737 - 2523816 | 40285.0 |
| cell wall hydrolase | DXA34_11570 | Not Available | Positive | 2523813 - 2525036 | 43328.8 |
| lysm peptidoglycan-binding domain-containing protein | DXA34_11575 | Not Available | Positive | 2525246 - 2527120 | 67438.2 |
| Trna-ser | Not Available | Not Available | Positive | 2527226 - 2527313 | Not Available |
| hydroxylamine reductase | DXA34_11585 | Not Available | Negative | 2527601 - 2529202 | 58098.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
