Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase | DXA34_11490 | Not Available | Negative | 2504929 - 2505879 | 34718.9 |
| glutamine--trna ligase/yqey domain fusion protein | DXA34_11495 | Not Available | Positive | 2506239 - 2507939 | 64968.1 |
| oxaloacetate decarboxylase | DXA34_11500 | Not Available | Positive | 2508597 - 2508884 | 10091.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DXA34_11505 | Not Available | Positive | 2508931 - 2509350 | 13842.8 |
| biotin/lipoyl-binding protein | DXA34_11510 | Not Available | Positive | 2509395 - 2509844 | 14820.0 |
| sodium ion-translocating decarboxylase subunit beta | DXA34_11515 | Not Available | Positive | 2509856 - 2510995 | 40187.1 |
| coa transferase subunit a | DXA34_11520 | Not Available | Positive | 2511039 - 2512001 | 35720.5 |
| coa-transferase subunit beta | DXA34_11525 | Not Available | Positive | 2512004 - 2512810 | 29571.4 |
| glutaconyl-coa decarboxylase subunit alpha | DXA34_11530 | Not Available | Positive | 2512912 - 2514678 | 64965.1 |
| 2-hydroxyglutaryl-coa dehydratase | DXA34_11535 | Not Available | Positive | 2515158 - 2515961 | 28056.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
