Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylating nicotinate-nucleotide diphosphorylase | DXA34_11440 | Not Available | Positive | 2499516 - 2500370 | 31280.8 |
| transcription repressor nadr | DXA34_11445 | Not Available | Positive | 2500665 - 2501240 | 21470.8 |
| hypothetical protein | DXA34_11450 | Not Available | Positive | 2501371 - 2501610 | 9087.16 |
| Trna-arg | Not Available | Not Available | Positive | 2501601 - 2501674 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 2501708 - 2501781 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2501805 - 2501876 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 2501885 - 2501960 | Not Available |
| duf3298/duf4163 domain-containing protein | DXA34_11475 | Not Available | Negative | 2502033 - 2502704 | 25778.2 |
| duf3793 family protein | DXA34_11480 | Not Available | Positive | 2503235 - 2503804 | 21824.6 |
| flavodoxin | DXA34_11485 | Not Available | Positive | 2503861 - 2504283 | 14718.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
