Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_00675 | Not Available | Positive | 145777 - 146961 | 45937.7 |
| hypothetical protein | DXA34_00680 | Not Available | Positive | 147044 - 147256 | 8124.1 |
| spovg family protein | DXA34_00685 | Not Available | Positive | 147298 - 147651 | 12819.3 |
| prepilin peptidase | DXA34_00690 | Not Available | Positive | 147652 - 148047 | 14021.8 |
| hypothetical protein | DXA34_00695 | Not Available | Positive | 148170 - 148547 | 14066.3 |
| flp pilus assembly protein cpab | DXA34_00700 | Not Available | Positive | 148566 - 149435 | 31516.1 |
| para family protein | DXA34_00705 | Not Available | Positive | 149436 - 150248 | 29860.1 |
| type ii secretion system protein e | DXA34_00710 | Not Available | Positive | 150242 - 151843 | 59874.4 |
| hypothetical protein | DXA34_00715 | Not Available | Positive | 151840 - 152769 | 34958.3 |
| secretion protein f | DXA34_00720 | Not Available | Positive | 152775 - 153647 | 32602.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
