Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXA34_11390 | Not Available | Positive | 2487607 - 2488533 | 32207.3 |
| nucleoside hydrolase | DXA34_11395 | Not Available | Positive | 2488554 - 2489552 | 35992.2 |
| ribokinase | DXA34_11400 | Not Available | Positive | 2489567 - 2490466 | 31953.1 |
| laci family dna-binding transcriptional regulator | DXA34_11405 | Not Available | Positive | 2490609 - 2492522 | 69836.1 |
| hypothetical protein | DXA34_11410 | Not Available | Negative | 2492660 - 2493295 | 22968.8 |
| glutamate formimidoyltransferase | DXA34_11415 | Not Available | Negative | 2493333 - 2494238 | 33722.9 |
| hypothetical protein | DXA34_11420 | Not Available | Negative | 2494280 - 2495653 | 49582.9 |
| murr/rpir family transcriptional regulator | DXA34_11425 | Not Available | Positive | 2496131 - 2496958 | 30557.6 |
| quinolinate synthase nada | DXA34_11430 | Not Available | Positive | 2497409 - 2498314 | 33266.0 |
| l-aspartate oxidase | DXA34_11435 | Not Available | Positive | 2498330 - 2499547 | 45055.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
