Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four-carbon acid sugar kinase family protein | DXA34_11335 | Not Available | Negative | 2474994 - 2476295 | 47909.4 |
| sigma-54-dependent transcriptional regulator | DXA34_11340 | Not Available | Positive | 2476567 - 2478363 | 66862.8 |
| duf2185 domain-containing protein | DXA34_11345 | Not Available | Negative | 2478696 - 2479724 | 39803.7 |
| methionyl aminopeptidase | DXA34_11350 | Not Available | Negative | 2479755 - 2480627 | 32280.4 |
| hypothetical protein | DXA34_11355 | Not Available | Positive | 2480818 - 2481012 | 7192.76 |
| duf4118 domain-containing protein | DXA34_11365 | Not Available | Positive | 2481461 - 2482585 | 41518.1 |
| dna-binding response regulator | DXA34_11370 | Not Available | Positive | 2482575 - 2483288 | 26847.3 |
| bmp family abc transporter substrate-binding protein | DXA34_11375 | Not Available | Positive | 2483694 - 2484833 | 40610.5 |
| abc transporter atp-binding protein | DXA34_11380 | Not Available | Positive | 2484916 - 2486460 | 57216.8 |
| abc transporter permease | DXA34_11385 | Not Available | Positive | 2486457 - 2487557 | 39723.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
