Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | DXA34_11285 | Not Available | Negative | 2462444 - 2463946 | 55512.6 |
| sugar abc transporter substrate-binding protein | DXA34_11290 | Not Available | Negative | 2464016 - 2465122 | 40407.6 |
| laci family transcriptional regulator | DXA34_11295 | Not Available | Negative | 2465171 - 2466214 | 38533.6 |
| sodium:glutamate symporter | DXA34_11300 | Not Available | Negative | 2466641 - 2467858 | 42819.9 |
| yhch/yjgk/yial family protein | DXA34_11305 | Not Available | Negative | 2468171 - 2468617 | 16704.7 |
| c4-dicarboxylate abc transporter permease | DXA34_11310 | Not Available | Negative | 2468648 - 2470600 | 69483.5 |
| hypothetical protein | DXA34_11315 | Not Available | Negative | 2470668 - 2471795 | 40093.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DXA34_11320 | Not Available | Negative | 2471809 - 2472858 | 37697.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DXA34_11325 | Not Available | Negative | 2472898 - 2473800 | 32463.9 |
| iron-containing alcohol dehydrogenase | DXA34_11330 | Not Available | Negative | 2473850 - 2475016 | 41905.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
