Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit beta | DXA34_11130 | Not Available | Positive | 2421203 - 2422105 | 33296.4 |
| citrate lyase subunit alpha | DXA34_11135 | Not Available | Positive | 2422107 - 2423666 | 56226.8 |
| tripartite tricarboxylate transporter substrate binding protein | DXA34_11140 | Not Available | Positive | 2424420 - 2425454 | 36199.2 |
| tripartite tricarboxylate transporter tctb family protein | DXA34_11145 | Not Available | Positive | 2425496 - 2426029 | 19494.2 |
| trap-t family transporter | DXA34_11150 | Not Available | Positive | 2426046 - 2427557 | 52000.7 |
| lysr family transcriptional regulator | DXA34_11155 | Not Available | Negative | 2427666 - 2428574 | 34394.1 |
| type iv secretion protein rhs | DXA34_11160 | Not Available | Negative | 2428648 - 2437592 | 329462.0 |
| v-type atp synthase subunit d | DXA34_11165 | Not Available | Negative | 2437962 - 2438636 | 25683.4 |
| v-type atp synthase subunit b | DXA34_11170 | Not Available | Negative | 2438655 - 2440025 | 50589.8 |
| v-type atp synthase subunit a | DXA34_11175 | Not Available | Negative | 2440026 - 2441795 | 64984.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
