Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine diphosphokinase | DXA34_11070 | Not Available | Positive | 2409628 - 2410278 | 24206.3 |
| pyridoxamine kinase | DXA34_11075 | Not Available | Positive | 2410332 - 2411228 | 32933.0 |
| serine--trna ligase | DXA34_11085 | Not Available | Positive | 2412128 - 2413405 | 48314.3 |
| citrate transporter | DXA34_11090 | Not Available | Positive | 2413570 - 2414703 | 41936.1 |
| cofactor-independent phosphoglycerate mutase | DXA34_11095 | Not Available | Positive | 2414879 - 2416081 | 44065.7 |
| hypothetical protein | DXA34_11100 | Not Available | Positive | 2416241 - 2416438 | 7379.32 |
| fibronectin/fibrinogen-binding protein | DXA34_11105 | Not Available | Negative | 2416432 - 2418171 | 65609.6 |
| triphosphoribosyl-dephospho-coa synthase | DXA34_11110 | Not Available | Negative | 2418147 - 2419187 | 37936.8 |
| citrate lyase holo-[acyl-carrier protein] synthase | DXA34_11115 | Not Available | Negative | 2419184 - 2419759 | 21893.3 |
| citrate lyase acyl carrier protein | DXA34_11125 | Not Available | Positive | 2420904 - 2421203 | 10591.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
