Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n' | DXA34_11020 | Not Available | Positive | 2398300 - 2400531 | 83691.4 |
| peptide deformylase | DXA34_11025 | Not Available | Positive | 2400556 - 2401035 | 17599.2 |
| methionyl-trna formyltransferase | DXA34_11030 | Not Available | Positive | 2401037 - 2401975 | 34362.9 |
| peptidase | DXA34_11035 | Not Available | Positive | 2402034 - 2402753 | 25627.5 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | DXA34_11040 | Not Available | Positive | 2402743 - 2404077 | 49595.9 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DXA34_11045 | Not Available | Positive | 2404086 - 2405138 | 39730.9 |
| stp1/irep family pp2c-type ser/thr phosphatase | DXA34_11050 | Not Available | Positive | 2405135 - 2405881 | 27093.5 |
| stk1 family pasta domain-containing ser/thr kinase | DXA34_11055 | Not Available | Positive | 2405878 - 2407998 | 77103.4 |
| ribosome small subunit-dependent gtpase a | DXA34_11060 | Not Available | Positive | 2408014 - 2408892 | 33013.9 |
| ribulose-phosphate 3-epimerase | DXA34_11065 | Not Available | Positive | 2408895 - 2409563 | 24071.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
