Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4/is5 family transposase | DXA34_10965 | Not Available | Positive | 2382169 - 2382615 | 16779.0 |
| hydrolase nlp/p60 | DXA34_10975 | Not Available | Positive | 2383618 - 2385339 | 61704.2 |
| lysr family transcriptional regulator | DXA34_10980 | Not Available | Negative | 2385569 - 2386522 | 35267.7 |
| hydratase | DXA34_10985 | Not Available | Positive | 2386710 - 2388995 | 83543.6 |
| [citrate (pro-3s)-lyase] ligase | DXA34_10990 | Not Available | Negative | 2389104 - 2390183 | 40473.0 |
| peptidase s14 | DXA34_10995 | Not Available | Positive | 2390597 - 2391406 | 29842.8 |
| hypothetical protein | DXA34_11000 | Not Available | Negative | 2391537 - 2392034 | 18640.3 |
| dna translocase ftsk | DXA34_11005 | Not Available | Positive | 2392208 - 2395273 | 112026.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DXA34_11010 | Not Available | Positive | 2395360 - 2396823 | 54554.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DXA34_11015 | Not Available | Positive | 2396893 - 2398260 | 49589.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
