Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DXA34_10865 | Not Available | Positive | 2360237 - 2360458 | 8404.21 |
| glyoxalase/bleomycin resistance/dioxygenase family protein | DXA34_10870 | Not Available | Negative | 2360557 - 2361015 | 17912.5 |
| arac family transcriptional regulator | DXA34_10875 | Not Available | Negative | 2361055 - 2361888 | 31698.1 |
| sialic acid-binding protein | DXA34_10880 | Not Available | Negative | 2362022 - 2363137 | 39578.5 |
| sdr family oxidoreductase | DXA34_10885 | Not Available | Negative | 2363248 - 2363997 | 26292.5 |
| sugar phosphate isomerase/epimerase | DXA34_10890 | Not Available | Negative | 2364029 - 2364847 | 30453.3 |
| gntr family transcriptional regulator | DXA34_10895 | Not Available | Positive | 2365249 - 2365908 | 25903.3 |
| duf1848 domain-containing protein | DXA34_10900 | Not Available | Negative | 2366113 - 2367060 | 35786.7 |
| peptide deformylase | DXA34_10905 | Not Available | Positive | 2367451 - 2367903 | 16983.7 |
| efflux rnd transporter periplasmic adaptor subunit | DXA34_10910 | Not Available | Positive | 2368051 - 2369811 | 61633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
