Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DXA34_10765 | Not Available | Positive | 2335420 - 2337297 | 68304.1 |
| hypothetical protein | DXA34_10770 | Not Available | Positive | 2337673 - 2339079 | 50725.0 |
| asparaginase | DXA34_10775 | Not Available | Positive | 2339108 - 2340124 | 36299.4 |
| abgt family transporter | DXA34_10780 | Not Available | Positive | 2340199 - 2341749 | 55067.9 |
| lysr family transcriptional regulator | DXA34_10785 | Not Available | Positive | 2341810 - 2342769 | 36430.3 |
| bmp family abc transporter substrate-binding protein | DXA34_10790 | Not Available | Positive | 2343074 - 2344288 | 42733.4 |
| abc transporter atp-binding protein | DXA34_10795 | Not Available | Positive | 2344515 - 2346107 | 57875.0 |
| abc transporter permease | DXA34_10800 | Not Available | Positive | 2346104 - 2347180 | 38624.4 |
| abc transporter permease | DXA34_10805 | Not Available | Positive | 2347177 - 2348139 | 34096.4 |
| excinuclease abc subunit uvra | DXA34_10810 | Not Available | Positive | 2348455 - 2351286 | 104297.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
