Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| basic amino acid abc transporter substrate-binding protein | DXA34_10710 | Not Available | Positive | 2322116 - 2322964 | 29766.1 |
| amino acid abc transporter permease | DXA34_10715 | Not Available | Positive | 2323049 - 2323741 | 26067.7 |
| amino acid abc transporter atp-binding protein | DXA34_10720 | Not Available | Positive | 2323731 - 2324480 | 27789.9 |
| integrase | DXA34_10725 | Not Available | Negative | 2324595 - 2325515 | 36086.8 |
| integrase | DXA34_10730 | Not Available | Negative | 2325556 - 2326518 | 37374.1 |
| glucan-binding protein | DXA34_10735 | Not Available | Positive | 2326967 - 2328565 | 60773.1 |
| atp-binding protein | DXA34_10745 | Not Available | Negative | 2329467 - 2330864 | 53194.8 |
| glucan-binding protein | DXA34_10750 | Not Available | Positive | 2331155 - 2332768 | 61656.6 |
| glucan-binding protein | DXA34_10755 | Not Available | Negative | 2332839 - 2334368 | 58469.3 |
| transcriptional regulator | DXA34_10760 | Not Available | Negative | 2334617 - 2335129 | 19836.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
