Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ylxr family protein | DXA34_10660 | Not Available | Positive | 2309400 - 2309675 | 10337.8 |
| 50s ribosomal protein l7ae | DXA34_10665 | Not Available | Positive | 2309662 - 2309994 | 12027.6 |
| translation initiation factor if-2 | DXA34_10670 | Not Available | Positive | 2309984 - 2313340 | 120699.0 |
| 30s ribosome-binding factor rbfa | DXA34_10675 | Not Available | Positive | 2313415 - 2313834 | 15590.5 |
| bifunctional oligoribonuclease/pap phosphatase nrna | DXA34_10680 | Not Available | Positive | 2313980 - 2314948 | 35864.5 |
| trna pseudouridine(55) synthase trub | DXA34_10685 | Not Available | Positive | 2314945 - 2315871 | 34721.0 |
| bifunctional riboflavin kinase/fad synthetase | DXA34_10690 | Not Available | Positive | 2315873 - 2316820 | 35973.2 |
| duf3842 family protein | DXA34_10695 | Not Available | Negative | 2317066 - 2317476 | 14246.6 |
| carbamoyl-phosphate synthase large subunit | DXA34_10700 | Not Available | Positive | 2317702 - 2320914 | 118011.0 |
| hypothetical protein | DXA34_10705 | Not Available | Negative | 2321061 - 2321819 | 29167.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
