Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DXA34_10610 | Not Available | Negative | 2299148 - 2300293 | 41382.8 |
| sensor histidine kinase | DXA34_10615 | Not Available | Negative | 2300527 - 2301753 | 45794.5 |
| dna-binding response regulator | DXA34_10620 | Not Available | Negative | 2301747 - 2302424 | 25500.7 |
| adenine phosphoribosyltransferase | DXA34_10625 | Not Available | Negative | 2302710 - 2303282 | 20818.2 |
| ncs2 family permease | DXA34_10630 | Not Available | Negative | 2303297 - 2304355 | 35838.5 |
| lysr family transcriptional regulator | DXA34_10635 | Not Available | Positive | 2304554 - 2305435 | 32805.2 |
| vanz family protein | DXA34_10640 | Not Available | Negative | 2305486 - 2306079 | 22412.3 |
| abc transporter atp-binding protein | DXA34_10645 | Not Available | Negative | 2306072 - 2307190 | 41177.1 |
| ribosome maturation factor rimp | DXA34_10650 | Not Available | Positive | 2307623 - 2308090 | 17981.4 |
| transcription termination/antitermination protein nusa | DXA34_10655 | Not Available | Positive | 2308112 - 2309350 | 45794.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
