Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cap domain-containing protein | DXA34_10385 | Not Available | Positive | 2247423 - 2248142 | 24760.8 |
| atp-binding protein | DXA34_10390 | Not Available | Negative | 2248300 - 2249634 | 51018.2 |
| endonuclease iii | DXA34_10400 | Not Available | Negative | 2251678 - 2252313 | 23716.9 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | DXA34_10405 | Not Available | Negative | 2252386 - 2253432 | 39321.1 |
| methyltransferase domain-containing protein | DXA34_10410 | Not Available | Negative | 2253436 - 2254941 | 57635.6 |
| atp-dependent helicase | DXA34_10415 | Not Available | Negative | 2254938 - 2256392 | 54470.2 |
| acyl-coa--6-aminopenicillanic acid acyltransferase | DXA34_10420 | Not Available | Negative | 2256721 - 2257746 | 38914.7 |
| hypothetical protein | DXA34_10425 | Not Available | Negative | 2257902 - 2259290 | 51672.0 |
| padr family transcriptional regulator | DXA34_10430 | Not Available | Negative | 2259277 - 2259618 | 12940.8 |
| sodium:proton antiporter | DXA34_10435 | Not Available | Positive | 2260373 - 2261545 | 41356.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
