Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic amino acid lyase | DXA34_10335 | Not Available | Negative | 2236408 - 2237928 | 55510.9 |
| lysr family transcriptional regulator | DXA34_10340 | Not Available | Positive | 2238064 - 2238954 | 34858.2 |
| Trna-gly | Not Available | Not Available | Positive | 2239022 - 2239092 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 2239123 - 2239195 | Not Available |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DXA34_10355 | Not Available | Negative | 2239383 - 2240261 | 32343.4 |
| tatd family deoxyribonuclease | DXA34_10360 | Not Available | Negative | 2240263 - 2241051 | 29656.1 |
| hypothetical protein | DXA34_10365 | Not Available | Negative | 2241331 - 2242143 | 30319.0 |
| methionine--trna ligase | DXA34_10370 | Not Available | Negative | 2242269 - 2244278 | 75804.0 |
| acyltransferase | DXA34_10375 | Not Available | Negative | 2244773 - 2245825 | 41134.2 |
| dna-binding response regulator | DXA34_10380 | Not Available | Positive | 2246569 - 2247255 | 25867.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
