Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DXA34_10025 | Not Available | Positive | 2160747 - 2161655 | 34008.1 |
| abc-2 transporter permease | DXA34_10030 | Not Available | Positive | 2161694 - 2162332 | 24289.4 |
| arsr family transcriptional regulator | DXA34_10035 | Not Available | Positive | 2162799 - 2163158 | 13768.6 |
| heavy-metal-associated domain-containing protein | DXA34_10040 | Not Available | Positive | 2163255 - 2163473 | 8128.98 |
| cadmium-translocating p-type atpase | DXA34_10045 | Not Available | Positive | 2163499 - 2165370 | 67065.0 |
| imidazolonepropionase | DXA34_10050 | Not Available | Negative | 2165440 - 2166693 | 46270.6 |
| urocanate hydratase | DXA34_10055 | Not Available | Negative | 2166858 - 2168882 | 75213.5 |
| histidine kinase | DXA34_10060 | Not Available | Positive | 2169776 - 2172619 | 110335.0 |
| histidine ammonia-lyase | DXA34_10065 | Not Available | Positive | 2173014 - 2174546 | 54555.6 |
| sodium:proton antiporter | DXA34_10070 | Not Available | Positive | 2174622 - 2175920 | 45248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
