Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4234 domain-containing protein | DXA34_09875 | Not Available | Negative | 2128005 - 2128349 | 12769.8 |
| methylglyoxal synthase | DXA34_09880 | Not Available | Negative | 2128428 - 2128892 | 17383.9 |
| response regulator | DXA34_09885 | Not Available | Positive | 2129247 - 2131493 | 83651.0 |
| rna polymerase sigma factor | DXA34_09890 | Not Available | Positive | 2131611 - 2132114 | 19948.9 |
| zf-hc2 domain-containing protein | DXA34_09895 | Not Available | Positive | 2132104 - 2133036 | 34688.2 |
| slc13/dass family transporter | DXA34_09900 | Not Available | Positive | 2133278 - 2134531 | 43690.3 |
| amidohydrolase | DXA34_09905 | Not Available | Positive | 2134550 - 2135392 | 30639.7 |
| hypothetical protein | DXA34_09910 | Not Available | Positive | 2135415 - 2135735 | 11915.4 |
| abc transporter atp-binding protein | DXA34_09915 | Not Available | Positive | 2135856 - 2137217 | 50454.8 |
| class i sam-dependent methyltransferase | DXA34_09920 | Not Available | Positive | 2137243 - 2138055 | 30280.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
