Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase-like family protein | DXA34_00525 | Not Available | Positive | 116742 - 117389 | 24565.3 |
| radical sam protein | DXA34_00535 | Not Available | Negative | 119008 - 119910 | 33984.3 |
| prolyl-trna synthetase associated domain-containing protein | DXA34_00540 | Not Available | Negative | 119949 - 120545 | 22587.1 |
| mate family efflux transporter | DXA34_00545 | Not Available | Positive | 120892 - 122253 | 49659.9 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DXA34_00550 | Not Available | Positive | 122415 - 124154 | 63870.6 |
| hypothetical protein | DXA34_00555 | Not Available | Positive | 124177 - 124386 | 8291.07 |
| hypothetical protein | DXA34_00560 | Not Available | Positive | 124387 - 125232 | 31817.8 |
| hypothetical protein | DXA34_00565 | Not Available | Positive | 125326 - 125754 | 15925.8 |
| hypothetical protein | DXA34_00570 | Not Available | Positive | 126016 - 126726 | 26507.1 |
| hypothetical protein | DXA34_00575 | Not Available | Positive | 126720 - 128354 | 62078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
