Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DXA34_09825 | Not Available | Negative | 2117834 - 2118829 | 38159.9 |
| citrate transporter | DXA34_09830 | Not Available | Positive | 2118902 - 2120206 | 46005.8 |
| tryptophan synthase subunit alpha | DXA34_09835 | Not Available | Negative | 2120282 - 2121067 | 27945.8 |
| tryptophan synthase subunit beta | DXA34_09840 | Not Available | Negative | 2121060 - 2122244 | 43089.4 |
| phosphoribosylanthranilate isomerase | DXA34_09845 | Not Available | Negative | 2122241 - 2122852 | 22104.6 |
| indole-3-glycerol phosphate synthase trpc | DXA34_09850 | Not Available | Negative | 2122849 - 2123658 | 29580.8 |
| anthranilate phosphoribosyltransferase | DXA34_09855 | Not Available | Negative | 2123670 - 2124680 | 36003.3 |
| aminodeoxychorismate/anthranilate synthase component ii | DXA34_09860 | Not Available | Negative | 2124852 - 2125421 | 20927.3 |
| anthranilate synthase component i | DXA34_09865 | Not Available | Negative | 2125418 - 2126905 | 55499.1 |
| duf2752 domain-containing protein | DXA34_09870 | Not Available | Negative | 2127611 - 2128012 | 14828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
