Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DXA34_00475 | Not Available | Positive | 105924 - 107114 | 44392.9 |
| sporulation integral membrane protein ytvi | DXA34_00480 | Not Available | Positive | 107202 - 108326 | 41385.0 |
| arac family transcriptional regulator | DXA34_00485 | Not Available | Negative | 108379 - 109293 | 35477.5 |
| hypothetical protein | DXA34_00490 | Not Available | Positive | 110314 - 110601 | 10292.5 |
| diaminopimelate epimerase | DXA34_00495 | Not Available | Positive | 110753 - 111625 | 32413.0 |
| glutamine synthetase | DXA34_00500 | Not Available | Positive | 111760 - 113067 | 48797.8 |
| antar domain-containing protein | DXA34_00505 | Not Available | Positive | 113109 - 113654 | 20139.5 |
| diaminopimelate epimerase | DXA34_00510 | Not Available | Positive | 113670 - 114479 | 29782.5 |
| n-acetylmuramoyl-l-alanine amidase | DXA34_00515 | Not Available | Positive | 114585 - 115364 | 28701.8 |
| tartrate dehydrogenase | DXA34_00520 | Not Available | Positive | 115576 - 116640 | 39097.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
