Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DXA34_09235 | Not Available | Negative | 1976352 - 1976729 | 13988.2 |
| site-specific integrase | DXA34_09240 | Not Available | Positive | 1977112 - 1978248 | 42956.6 |
| xre family transcriptional regulator | DXA34_09245 | Not Available | Positive | 1978250 - 1978693 | 16969.0 |
| 23s rrna (adenine(2058)-n(6))-methyltransferase erm(b) | DXA34_09250 | Not Available | Positive | 1978728 - 1979465 | 28758.1 |
| aaa family atpase | DXA34_09265 | Not Available | Positive | 1979874 - 1980419 | 20239.2 |
| zeta-toxin | DXA34_09280 | Not Available | Positive | 1980893 - 1981009 | 4306.3 |
| hypothetical protein | DXA34_09285 | Not Available | Negative | 1981472 - 1981686 | 7941.69 |
| chromate transporter | DXA34_09290 | Not Available | Positive | 1981947 - 1982474 | 18918.7 |
| chromate transporter | DXA34_09295 | Not Available | Positive | 1982455 - 1982991 | 19104.4 |
| yicc family protein | DXA34_09300 | Not Available | Positive | 1983218 - 1984096 | 33632.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
