Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DXA34_09185 | Not Available | Positive | 1967860 - 1969251 | 52687.1 |
| hypothetical protein | DXA34_09190 | Not Available | Negative | 1970041 - 1970346 | 11858.0 |
| site-specific integrase | DXA34_09195 | Not Available | Negative | 1970432 - 1971805 | 52005.6 |
| dna-binding protein | DXA34_09200 | Not Available | Negative | 1971810 - 1972433 | 24491.3 |
| dna-binding protein | DXA34_09205 | Not Available | Negative | 1972551 - 1972787 | 9052.84 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DXA34_09210 | Not Available | Negative | 1972794 - 1973201 | 15244.7 |
| xre family transcriptional regulator | DXA34_09215 | Not Available | Negative | 1973716 - 1973931 | 8038.71 |
| hypothetical protein | DXA34_09220 | Not Available | Negative | 1974284 - 1974847 | 22195.9 |
| xre family transcriptional regulator | DXA34_09225 | Not Available | Positive | 1975134 - 1975583 | 16995.2 |
| imma/irre family metallo-endopeptidase | DXA34_09230 | Not Available | Positive | 1975635 - 1976189 | 21575.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
