Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4261 domain-containing protein | DXA34_09135 | Not Available | Positive | 1961588 - 1962466 | 33290.8 |
| wyl domain-containing protein | DXA34_09140 | Not Available | Positive | 1962636 - 1963598 | 37268.7 |
| xre family transcriptional regulator | DXA34_09145 | Not Available | Positive | 1963730 - 1964098 | 14088.9 |
| imma/irre family metallo-endopeptidase | DXA34_09150 | Not Available | Positive | 1964110 - 1964724 | 23124.4 |
| hypothetical protein | DXA34_09155 | Not Available | Positive | 1964829 - 1965365 | 21075.4 |
| sigma-70 family rna polymerase sigma factor | DXA34_09160 | Not Available | Positive | 1965666 - 1966214 | 21533.4 |
| hypothetical protein | DXA34_09165 | Not Available | Positive | 1966253 - 1966450 | 7740.28 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DXA34_09170 | Not Available | Positive | 1966702 - 1967082 | 14448.6 |
| dna-binding protein | DXA34_09175 | Not Available | Positive | 1967113 - 1967340 | 8739.22 |
| dna-binding protein | DXA34_09180 | Not Available | Positive | 1967445 - 1967882 | 17004.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
