Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionate catabolism operon regulatory protein prpr | DXA34_08820 | Not Available | Negative | 1893719 - 1895494 | 67861.6 |
| alcohol dehydrogenase | DXA34_08825 | Not Available | Positive | 1895738 - 1896763 | 36764.5 |
| trap transporter substrate-binding protein | DXA34_08830 | Not Available | Positive | 1896792 - 1897865 | 39252.5 |
| trap transporter small permease | DXA34_08835 | Not Available | Positive | 1897946 - 1898422 | 17936.8 |
| trap transporter large permease | DXA34_08840 | Not Available | Positive | 1898419 - 1899681 | 44677.1 |
| aldolase | DXA34_08845 | Not Available | Positive | 1899763 - 1901622 | 67913.7 |
| cation:proton antiporter | DXA34_08850 | Not Available | Negative | 1901655 - 1902860 | 42152.2 |
| amidophosphoribosyltransferase | DXA34_08855 | Not Available | Negative | 1902995 - 1904425 | 51444.1 |
| glutamine synthetase type iii | DXA34_08860 | Not Available | Negative | 1904462 - 1906561 | 77584.9 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DXA34_08865 | Not Available | Negative | 1906784 - 1908616 | 68025.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
