Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | DXA34_08765 | Not Available | Positive | 1874962 - 1877499 | 95232.4 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DXA34_08770 | Not Available | Positive | 1877684 - 1881214 | 127553.0 |
| mate family efflux transporter | DXA34_08775 | Not Available | Positive | 1881402 - 1882736 | 48546.6 |
| lysophospholipase | DXA34_08780 | Not Available | Positive | 1882754 - 1883728 | 36469.7 |
| atp-binding protein | DXA34_08785 | Not Available | Positive | 1884224 - 1885765 | 56200.2 |
| dna-protecting protein dpra | DXA34_08790 | Not Available | Positive | 1885809 - 1886981 | 43538.9 |
| type i dna topoisomerase | DXA34_08795 | Not Available | Positive | 1886991 - 1889072 | 77741.6 |
| gtp-sensing pleiotropic transcriptional regulator cody | DXA34_08800 | Not Available | Positive | 1889195 - 1889986 | 28906.9 |
| yfcc family protein | DXA34_08805 | Not Available | Negative | 1890222 - 1891709 | 53180.8 |
| aminoacyl-histidine dipeptidase | DXA34_08810 | Not Available | Negative | 1891721 - 1893196 | 54437.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
