Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_08610 | Not Available | Negative | 1844933 - 1845415 | 18176.7 |
| abc transporter permease | DXA34_08615 | Not Available | Positive | 1846196 - 1847113 | 33884.6 |
| abc transporter permease | DXA34_08620 | Not Available | Positive | 1847129 - 1848280 | 42722.0 |
| abc transporter atp-binding protein | DXA34_08625 | Not Available | Positive | 1848292 - 1849311 | 37681.9 |
| abc transporter atp-binding protein | DXA34_08630 | Not Available | Positive | 1849308 - 1850267 | 35403.1 |
| peptide abc transporter substrate-binding protein | DXA34_08635 | Not Available | Positive | 1850488 - 1852191 | 62232.5 |
| peptidylprolyl isomerase | DXA34_08640 | Not Available | Positive | 1852470 - 1852955 | 18020.3 |
| collagen-like protein | DXA34_08645 | Not Available | Negative | 1853228 - 1854025 | 27594.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DXA34_08655 | Not Available | Positive | 1854891 - 1856057 | 40677.3 |
| cobinamide kinase | DXA34_08660 | Not Available | Positive | 1856156 - 1856779 | 23191.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
