Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_08345 | Not Available | Negative | 1797398 - 1799413 | 75403.2 |
| gntr family transcriptional regulator | DXA34_08350 | Not Available | Positive | 1800206 - 1800580 | 13977.7 |
| abc transporter atp-binding protein | DXA34_08355 | Not Available | Positive | 1800583 - 1801437 | 31971.1 |
| abc-2 transporter permease | DXA34_08360 | Not Available | Positive | 1801438 - 1802076 | 23370.6 |
| mate family efflux transporter | DXA34_08365 | Not Available | Negative | 1802039 - 1803418 | 48465.5 |
| 4fe-4s dicluster domain-containing protein | DXA34_08370 | Not Available | Negative | 1803705 - 1805159 | 52986.3 |
| serine/threonine-protein phosphatase | DXA34_08375 | Not Available | Negative | 1805246 - 1806424 | 43755.0 |
| pas domain-containing protein | DXA34_08380 | Not Available | Negative | 1806424 - 1808139 | 63897.0 |
| (2fe-2s) ferredoxin domain-containing protein | DXA34_08385 | Not Available | Negative | 1808190 - 1808435 | 8963.9 |
| hypothetical protein | DXA34_08390 | Not Available | Negative | 1808888 - 1809169 | 9640.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
