Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abgt family transporter | DXA34_00370 | Not Available | Negative | 81354 - 82913 | 55441.4 |
| ferredoxin | DXA34_00375 | Not Available | Negative | 83233 - 84057 | 29814.8 |
| is110 family transposase | DXA34_00385 | Not Available | Negative | 84796 - 86031 | 46644.7 |
| 6-phosphofructokinase | DXA34_00390 | Not Available | Positive | 86599 - 87573 | 34854.2 |
| hypothetical protein | DXA34_00395 | Not Available | Positive | 87679 - 88077 | 15184.9 |
| trna dihydrouridine synthase dusb | DXA34_00400 | Not Available | Positive | 88074 - 89033 | 35471.3 |
| transcription elongation factor grea | DXA34_00405 | Not Available | Positive | 89167 - 89649 | 18145.5 |
| lysine--trna ligase | DXA34_00410 | Not Available | Positive | 89677 - 91611 | 73427.4 |
| diguanylate cyclase | DXA34_00415 | Not Available | Negative | 91750 - 93834 | 79492.5 |
| hypothetical protein | DXA34_00420 | Not Available | Positive | 94286 - 94816 | 20078.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
