Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trpr yerc/yecd | DXA34_08230 | Not Available | Negative | 1761542 - 1761853 | 11859.9 |
| cof-type had-iib family hydrolase | DXA34_08235 | Not Available | Negative | 1761970 - 1762803 | 31239.1 |
| abc transporter substrate-binding protein | DXA34_08240 | Not Available | Positive | 1762985 - 1763983 | 36230.5 |
| hypothetical protein | DXA34_08245 | Not Available | Negative | 1764285 - 1764647 | 13748.4 |
| chemotaxis protein ched | DXA34_08265 | Not Available | Negative | 1767296 - 1767778 | 17427.2 |
| chemotaxis protein chec | DXA34_08270 | Not Available | Negative | 1767768 - 1768391 | 22976.3 |
| response regulator | DXA34_08275 | Not Available | Negative | 1768388 - 1768789 | 14574.9 |
| methyl-accepting chemotaxis protein | DXA34_08280 | Not Available | Negative | 1768786 - 1770462 | 60744.6 |
| hypothetical protein | DXA34_08285 | Not Available | Negative | 1770482 - 1770964 | 17829.5 |
| hypothetical protein | DXA34_08290 | Not Available | Negative | 1770961 - 1771575 | 21406.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
