Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wyl domain-containing protein | DXA34_08180 | Not Available | Negative | 1748623 - 1749603 | 38378.9 |
| wyl domain-containing protein | DXA34_08185 | Not Available | Negative | 1749590 - 1750834 | 48632.4 |
| slipin family protein | DXA34_08190 | Not Available | Positive | 1751700 - 1752797 | 41731.1 |
| duf4366 domain-containing protein | DXA34_08195 | Not Available | Negative | 1752984 - 1753271 | 11148.9 |
| atp-dependent dna helicase pcra | DXA34_08200 | Not Available | Negative | 1753454 - 1755895 | 91058.9 |
| mbl fold metallo-hydrolase | DXA34_08205 | Not Available | Negative | 1756038 - 1757033 | 37886.3 |
| mate family efflux transporter | DXA34_08210 | Not Available | Negative | 1757035 - 1758393 | 48508.3 |
| marr family transcriptional regulator | DXA34_08215 | Not Available | Negative | 1758467 - 1758898 | 16928.4 |
| duf1836 domain-containing protein | DXA34_08220 | Not Available | Positive | 1759256 - 1759864 | 23683.4 |
| bile acid:sodium symporter family protein | DXA34_08225 | Not Available | Positive | 1760374 - 1761333 | 33386.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
