Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-c crispr-associated protein cas8c/csd1 | DXA34_08120 | Not Available | Negative | 1735286 - 1737889 | 100657.0 |
| type i-c crispr-associated protein cas5 | DXA34_08125 | Not Available | Negative | 1737855 - 1738610 | 29276.9 |
| crispr-associated endonuclease cas3'' | DXA34_08130 | Not Available | Negative | 1738656 - 1740980 | 88456.1 |
| hypothetical protein | DXA34_08135 | Not Available | Negative | 1741658 - 1741987 | 12339.9 |
| hypothetical protein | DXA34_08150 | Not Available | Negative | 1742591 - 1743538 | 36331.4 |
| crispr system precrrna processing endoribonuclease ramp protein cas6 | DXA34_08155 | Not Available | Negative | 1743568 - 1744476 | 34515.7 |
| hypothetical protein | DXA34_08160 | Not Available | Negative | 1745149 - 1745409 | 9513.3 |
| cell filamentation protein fic | DXA34_08165 | Not Available | Negative | 1745550 - 1746593 | 40836.4 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DXA34_08170 | Not Available | Negative | 1746850 - 1748226 | 51432.6 |
| hypothetical protein | DXA34_08175 | Not Available | Negative | 1748228 - 1748437 | 7995.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
