Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanr-abdegln family dna-binding response regulator | DXA34_08060 | Not Available | Negative | 1722319 - 1723026 | 26847.4 |
| zn-dependent protease | DXA34_08065 | Not Available | Negative | 1723288 - 1724217 | 35020.1 |
| duf1697 domain-containing protein | DXA34_08075 | Not Available | Negative | 1724960 - 1725499 | 20634.6 |
| glyoxalase | DXA34_08080 | Not Available | Negative | 1725562 - 1726026 | 18044.8 |
| duf3795 domain-containing protein | DXA34_08085 | Not Available | Negative | 1726105 - 1726656 | 20854.3 |
| hypothetical protein | DXA34_08090 | Not Available | Negative | 1726931 - 1727194 | 9607.5 |
| crispr-associated endonuclease cas2 | DXA34_08095 | Not Available | Negative | 1732232 - 1732522 | 11100.5 |
| type i-c crispr-associated endonuclease cas1 | DXA34_08100 | Not Available | Negative | 1732533 - 1733564 | 38658.1 |
| crispr-associated protein cas4 | DXA34_08105 | Not Available | Negative | 1733561 - 1734172 | 23113.1 |
| type i-c crispr-associated protein cas7/csd2 | DXA34_08115 | Not Available | Negative | 1734369 - 1735253 | 32589.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
