Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3788 domain-containing protein | DXA34_08010 | Not Available | Negative | 1715086 - 1715517 | 16858.4 |
| arac family transcriptional regulator | DXA34_08015 | Not Available | Negative | 1715531 - 1716460 | 35548.5 |
| hypothetical protein | DXA34_08020 | Not Available | Negative | 1716500 - 1716727 | 8385.27 |
| tetr/acrr family transcriptional regulator | DXA34_08025 | Not Available | Positive | 1716825 - 1717406 | 22290.4 |
| abc transporter atp-binding protein | DXA34_08030 | Not Available | Positive | 1717511 - 1718356 | 31761.0 |
| abc transporter permease | DXA34_08035 | Not Available | Positive | 1718353 - 1719036 | 25159.0 |
| abc transporter permease | DXA34_08040 | Not Available | Positive | 1719033 - 1719731 | 25630.7 |
| cysteine hydrolase | DXA34_08045 | Not Available | Negative | 1720105 - 1720644 | 20306.7 |
| transcriptional regulator | DXA34_08050 | Not Available | Negative | 1720733 - 1721092 | 13612.2 |
| sensor histidine kinase | DXA34_08055 | Not Available | Negative | 1721184 - 1722332 | 42928.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
