Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4397 domain-containing protein | DXA34_07900 | Not Available | Positive | 1690952 - 1691851 | 33047.2 |
| mate family efflux transporter | DXA34_07905 | Not Available | Negative | 1691940 - 1693301 | 49444.4 |
| hypothetical protein | DXA34_07910 | Not Available | Negative | 1693811 - 1695013 | 45757.5 |
| mboat family protein | DXA34_07915 | Not Available | Negative | 1695031 - 1696437 | 52838.5 |
| duf4358 domain-containing protein | DXA34_07920 | Not Available | Negative | 1696475 - 1697149 | 23972.1 |
| 3-deoxy-7-phosphoheptulonate synthase | DXA34_07925 | Not Available | Positive | 1697324 - 1698352 | 38789.4 |
| mfs transporter | DXA34_07930 | Not Available | Negative | 1698493 - 1699641 | 41691.2 |
| duf3298 domain-containing protein | DXA34_07935 | Not Available | Negative | 1699905 - 1700933 | 39105.2 |
| sigma-70 family rna polymerase sigma factor | DXA34_07940 | Not Available | Negative | 1700930 - 1701418 | 19038.1 |
| parb/repb/spo0j family partition protein | DXA34_07950 | Not Available | Positive | 1702179 - 1703582 | 51367.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
