Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_07735 | Not Available | Negative | 1651697 - 1652749 | 40616.7 |
| licd family protein | DXA34_07740 | Not Available | Negative | 1652691 - 1653548 | 34015.0 |
| nad-dependent epimerase/dehydratase family protein | DXA34_07745 | Not Available | Negative | 1653578 - 1654426 | 32014.8 |
| atp-grasp domain-containing protein | DXA34_07750 | Not Available | Negative | 1654441 - 1655514 | 39941.5 |
| diaminopimelate decarboxylase | DXA34_07755 | Not Available | Negative | 1655533 - 1656762 | 46726.2 |
| sugar transferase | DXA34_07760 | Not Available | Negative | 1656755 - 1657396 | 25122.8 |
| pig-l family deacetylase | DXA34_07765 | Not Available | Negative | 1657389 - 1658078 | 25370.4 |
| hypothetical protein | DXA34_07770 | Not Available | Negative | 1658252 - 1658806 | 21386.1 |
| transcription termination factor nusg | DXA34_07775 | Not Available | Negative | 1658959 - 1659528 | 22525.1 |
| cpbp family intramembrane metalloprotease | DXA34_07780 | Not Available | Positive | 1659981 - 1660955 | 36761.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
