Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_07530 | Not Available | Negative | 1610595 - 1612046 | 55245.2 |
| dna-binding response regulator | DXA34_07535 | Not Available | Negative | 1612343 - 1613041 | 25761.1 |
| sensor histidine kinase kdpd | DXA34_07540 | Not Available | Negative | 1613034 - 1615721 | 99154.1 |
| hypothetical protein | DXA34_07545 | Not Available | Positive | 1615800 - 1616060 | 9875.45 |
| potassium-transporting atpase subunit kdpc | DXA34_07550 | Not Available | Negative | 1616127 - 1616771 | 23037.5 |
| k(+)-transporting atpase subunit b | DXA34_07555 | Not Available | Negative | 1616851 - 1618935 | 74099.5 |
| potassium-transporting atpase subunit kdpa | DXA34_07560 | Not Available | Negative | 1618954 - 1620666 | 61878.8 |
| k(+)-transporting atpase subunit f | DXA34_07565 | Not Available | Negative | 1620695 - 1620781 | 3117.05 |
| hypothetical protein | DXA34_07570 | Not Available | Negative | 1621086 - 1621280 | 7355.33 |
| type i 3-dehydroquinate dehydratase | DXA34_07575 | Not Available | Positive | 1621554 - 1622306 | 27396.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
