Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DXA34_07270 | Not Available | Negative | 1548789 - 1549505 | 27399.8 |
| hypothetical protein | DXA34_07275 | Not Available | Negative | 1549630 - 1549995 | 14305.4 |
| ggdef domain-containing protein | DXA34_07280 | Not Available | Negative | 1550122 - 1551396 | 49889.8 |
| hypothetical protein | DXA34_07285 | Not Available | Negative | 1551628 - 1551948 | 10853.5 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DXA34_07290 | Not Available | Negative | 1552036 - 1552791 | 26919.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DXA34_07295 | Not Available | Negative | 1552814 - 1553698 | 31750.4 |
| cob(i)yrinic acid a c-diamide adenosyltransferase | DXA34_07300 | Not Available | Negative | 1554250 - 1554783 | 19936.5 |
| single-stranded dna-binding protein | DXA34_07305 | Not Available | Negative | 1555056 - 1555688 | 24178.9 |
| translational gtpase typa | DXA34_07310 | Not Available | Negative | 1555950 - 1557791 | 68397.9 |
| yigz family protein | DXA34_07315 | Not Available | Negative | 1557923 - 1558573 | 23798.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
