Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | DXA34_00270 | Not Available | Negative | 61351 - 63240 | 69626.8 |
| polyprenyl synthetase family protein | DXA34_00275 | Not Available | Negative | 63316 - 64200 | 32630.4 |
| exodeoxyribonuclease vii small subunit | DXA34_00280 | Not Available | Negative | 64200 - 64478 | 10327.1 |
| exodeoxyribonuclease vii large subunit | DXA34_00285 | Not Available | Negative | 64496 - 65710 | 44772.0 |
| transcription antitermination factor nusb | DXA34_00290 | Not Available | Negative | 65714 - 66157 | 16685.9 |
| hypothetical protein | DXA34_00295 | Not Available | Positive | 66470 - 66733 | 9371.31 |
| dihydrodipicolinate synthase family protein | DXA34_00300 | Not Available | Negative | 66884 - 67783 | 33297.4 |
| gfo/idh/moca family oxidoreductase | DXA34_00305 | Not Available | Negative | 67780 - 68871 | 40069.2 |
| yhch/yjgk/yial family protein | DXA34_00310 | Not Available | Negative | 68914 - 69369 | 17695.1 |
| sugar phosphate isomerase/epimerase | DXA34_00315 | Not Available | Negative | 69452 - 70375 | 34742.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
