Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter family protein | DXA34_07110 | Not Available | Negative | 1511027 - 1512454 | 50898.0 |
| yebc/pmpr family dna-binding transcriptional regulator | DXA34_07115 | Not Available | Negative | 1512939 - 1513667 | 26486.9 |
| hypothetical protein | DXA34_07120 | Not Available | Positive | 1513742 - 1514041 | 11009.6 |
| citrate transporter | DXA34_07125 | Not Available | Positive | 1514058 - 1515443 | 47771.8 |
| asparagine synthase (glutamine-hydrolyzing) | DXA34_07130 | Not Available | Positive | 1515611 - 1517470 | 70377.1 |
| sugar o-acetyltransferase | DXA34_07135 | Not Available | Negative | 1517490 - 1518128 | 23836.5 |
| mate family efflux transporter | DXA34_07140 | Not Available | Negative | 1518191 - 1519546 | 48989.0 |
| hlyc/corc family transporter | DXA34_07145 | Not Available | Negative | 1519685 - 1521046 | 50884.0 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DXA34_07150 | Not Available | Negative | 1521240 - 1521587 | 13107.2 |
| alanine racemase | DXA34_07160 | Not Available | Negative | 1522205 - 1523386 | 43866.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
