Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | DXA34_07010 | Not Available | Negative | 1490913 - 1492790 | 69125.7 |
| Trna-gly | Not Available | Not Available | Positive | 1493089 - 1493159 | Not Available |
| marr family transcriptional regulator | DXA34_07020 | Not Available | Positive | 1493327 - 1493764 | 17121.6 |
| mate family efflux transporter | DXA34_07025 | Not Available | Positive | 1493757 - 1495088 | 48035.8 |
| mbl fold metallo-hydrolase | DXA34_07030 | Not Available | Positive | 1495142 - 1496197 | 38060.9 |
| Trna-pro | Not Available | Not Available | Positive | 1496599 - 1496672 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1496685 - 1496756 | Not Available |
| duf1540 domain-containing protein | DXA34_07045 | Not Available | Negative | 1496906 - 1497076 | 6161.23 |
| manganese catalase family protein | DXA34_07050 | Not Available | Negative | 1497166 - 1497774 | 23238.6 |
| spore coat protein cotjb | DXA34_07055 | Not Available | Negative | 1497778 - 1498032 | 9930.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
