Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan-rich sensory protein | DXA34_06960 | Not Available | Positive | 1483088 - 1483552 | 17679.3 |
| Trna-pro | Not Available | Not Available | Positive | 1483639 - 1483712 | Not Available |
| cof-type had-iib family hydrolase | DXA34_06970 | Not Available | Positive | 1483966 - 1484748 | 29149.0 |
| hypothetical protein | DXA34_06975 | Not Available | Negative | 1484769 - 1485050 | 10865.1 |
| hypothetical protein | DXA34_06980 | Not Available | Negative | 1485434 - 1485727 | 9549.37 |
| hypothetical protein | DXA34_06985 | Not Available | Negative | 1485930 - 1486253 | 12180.1 |
| hypothetical protein | DXA34_06990 | Not Available | Positive | 1486373 - 1486612 | 8924.72 |
| trkh family potassium uptake protein | DXA34_06995 | Not Available | Negative | 1486609 - 1488048 | 52709.0 |
| trk system potassium transporter trka | DXA34_07000 | Not Available | Negative | 1488063 - 1489421 | 49747.8 |
| glycine betaine/l-proline abc transporter atp-binding protein | DXA34_07005 | Not Available | Negative | 1489706 - 1490926 | 45309.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
