Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter family protein | DXA34_06850 | Not Available | Positive | 1463441 - 1464865 | 52314.0 |
| sensor histidine kinase | DXA34_06855 | Not Available | Positive | 1465019 - 1466365 | 50946.6 |
| sigma-54-dependent fis family transcriptional regulator | DXA34_06860 | Not Available | Positive | 1466340 - 1467695 | 51576.3 |
| lamb/ycsf family protein | DXA34_06865 | Not Available | Positive | 1467912 - 1468670 | 27234.8 |
| divalent metal cation transporter | DXA34_06870 | Not Available | Positive | 1468718 - 1469935 | 42276.5 |
| 5-oxoprolinase subunit pxpb | DXA34_06875 | Not Available | Positive | 1470003 - 1470731 | 26954.4 |
| allophanate hydrolase subunit 2 family protein | DXA34_06880 | Not Available | Positive | 1470734 - 1471831 | 39471.2 |
| putative hydro-lyase | DXA34_06885 | Not Available | Positive | 1471870 - 1472679 | 29864.7 |
| alpha/beta hydrolase | DXA34_06890 | Not Available | Positive | 1472844 - 1473842 | 37695.9 |
| 50s ribosomal protein l13 | DXA34_06895 | Not Available | Positive | 1474023 - 1474457 | 16171.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
