Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | DXA34_06750 | Not Available | Positive | 1446589 - 1446702 | 4307.53 |
| 30s ribosomal protein s13 | DXA34_06755 | Not Available | Positive | 1446893 - 1447261 | 13728.8 |
| 30s ribosomal protein s11 | DXA34_06760 | Not Available | Positive | 1447343 - 1447744 | 14097.2 |
| 30s ribosomal protein s4 | DXA34_06765 | Not Available | Positive | 1447763 - 1448356 | 22846.2 |
| dna-directed rna polymerase subunit alpha | DXA34_06770 | Not Available | Positive | 1448541 - 1449503 | 35555.5 |
| 50s ribosomal protein l17 | DXA34_06775 | Not Available | Positive | 1449634 - 1450170 | 20063.7 |
| glutamine amidotransferase | DXA34_06780 | Not Available | Negative | 1450317 - 1450955 | 22933.5 |
| yafy family transcriptional regulator | DXA34_06785 | Not Available | Positive | 1451090 - 1452028 | 36572.5 |
| n-acetylmuramoyl-l-alanine amidase family protein | DXA34_06790 | Not Available | Positive | 1452157 - 1453413 | 46873.2 |
| n-acetylmuramoyl-l-alanine amidase family protein | DXA34_06795 | Not Available | Positive | 1453453 - 1454508 | 39566.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
