Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_00220 | Not Available | Negative | 51123 - 51338 | 8351.94 |
| hypothetical protein | DXA34_00225 | Not Available | Negative | 51487 - 51990 | 19702.5 |
| hypothetical protein | DXA34_00230 | Not Available | Negative | 52174 - 53349 | 45788.2 |
| integrase | DXA34_00235 | Not Available | Negative | 53959 - 54798 | 32724.2 |
| hypothetical protein | DXA34_00240 | Not Available | Negative | 55146 - 55832 | 26498.8 |
| plp-dependent aminotransferase family protein | DXA34_00245 | Not Available | Negative | 55909 - 57270 | 51524.9 |
| dna repair protein recn | DXA34_00250 | Not Available | Negative | 57267 - 58940 | 63062.2 |
| arginine repressor | DXA34_00255 | Not Available | Negative | 58952 - 59401 | 16710.4 |
| nad(+)/nadh kinase | DXA34_00260 | Not Available | Negative | 59659 - 60507 | 31720.2 |
| tlya family rrna (cytidine-2'-o)-methyltransferase | DXA34_00265 | Not Available | Negative | 60545 - 61354 | 29843.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
