Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | DXA34_06595 | Not Available | Positive | 1427619 - 1429010 | 51056.8 |
| aminotransferase class v-fold plp-dependent enzyme | DXA34_06600 | Not Available | Positive | 1429033 - 1430595 | 58483.4 |
| atp-nad kinase | DXA34_06605 | Not Available | Positive | 1430736 - 1431884 | 41227.1 |
| hypothetical protein | DXA34_06615 | Not Available | Positive | 1432283 - 1432603 | 11367.5 |
| 30s ribosomal protein s10 | DXA34_06620 | Not Available | Positive | 1432890 - 1433207 | 11886.7 |
| 50s ribosomal protein l3 | DXA34_06625 | Not Available | Positive | 1433345 - 1433980 | 22808.8 |
| 50s ribosomal protein l4 | DXA34_06630 | Not Available | Positive | 1434008 - 1434628 | 22504.9 |
| 50s ribosomal protein l23 | DXA34_06635 | Not Available | Positive | 1434628 - 1434927 | 11197.8 |
| 50s ribosomal protein l2 | DXA34_06640 | Not Available | Positive | 1435214 - 1436056 | 30027.7 |
| 30s ribosomal protein s19 | DXA34_06645 | Not Available | Positive | 1436076 - 1436357 | 10439.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
