Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-sec(p) | Not Available | Not Available | Positive | 1416303 - 1416395 | Not Available |
| l-seryl-trna(sec) selenium transferase | DXA34_06550 | Not Available | Positive | 1416429 - 1417853 | 53028.2 |
| selenocysteine-specific translation elongation factor | DXA34_06555 | Not Available | Positive | 1417846 - 1419756 | 71399.2 |
| yede-related selenium metabolism membrane protein | DXA34_06560 | Not Available | Positive | 1419777 - 1420874 | 37872.4 |
| sulfurtransferase tusa family protein | DXA34_06565 | Not Available | Positive | 1420893 - 1421099 | 7421.84 |
| duf3343 domain-containing protein | DXA34_06570 | Not Available | Positive | 1421118 - 1421357 | 8879.07 |
| aminotransferase class v-fold plp-dependent enzyme | DXA34_06575 | Not Available | Positive | 1421375 - 1422514 | 40664.4 |
| na+/h+ antiporter nhac family protein | DXA34_06580 | Not Available | Negative | 1422646 - 1424256 | 57468.4 |
| aaa family atpase | DXA34_06585 | Not Available | Negative | 1424542 - 1426284 | 64127.6 |
| sdr family oxidoreductase | DXA34_06590 | Not Available | Positive | 1426780 - 1427574 | 27862.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
